PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC038425.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family B3
Protein Properties Length: 285aa    MW: 32147.9 Da    PI: 9.5938
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC038425.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.16.6e-13173283199
                   EEEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTH.HHHHHHHT--TT-EEEEEE CS
            B3   1 ffkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesg.rsWevkliyrkksgryvltkGW.keFvkangLkegDfvvFkl 84 
                   f+k lt+sd + ++rl + ++f+++h           + ++ ++ +++++d +   + ++ + ++ +s++yvl++GW keFvk  gL +gD v ++ 
  EcC038425.10 173 FKKRLTQSDLGHLSRLLIRRDFVKSHflrwmneetvrQVESGKGADVIVRDMDTcSEHRLVFVFWASSRSYVLKGGWmKEFVKRRGLAAGDEVGIYW 269
                   899**************************98888777545558889999997766778888888*************668**************997 PP

                   -SS.SEE..EEEEE-S CS
            B3  85 dgr.sefelvvkvfrk 99 
                   d   s+f  +++v+rk
  EcC038425.10 270 DAIaSKF--HFSVLRK 283
                   7655666..8888876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019368.04E-16171283IPR015300DNA-binding pseudobarrel domain
CDDcd100179.33E-19173282No hitNo description
PfamPF023623.6E-9173282IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.9E-16173283IPR015300DNA-binding pseudobarrel domain
SMARTSM010193.6E-6173284IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0015074Biological ProcessDNA integration
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MKLIDFLGPD SPPIGDILRG EVHSPPLTDS LLSRLSCQQD REKKPIGNHL RSEVHLPASM  60
DSSSCSCLYY LHNQEKNGHE GVRCISSARV VVDREFFPLA PDQNTKEVGG PRQEVVPAQP  120
KRKSMASLTN AESLIAEKKA KCKRTQKGKK EASGCGAEEV STELTLLFDP YKFKKRLTQS  180
DLGHLSRLLI RRDFVKSHFL RWMNEETVRQ VESGKGADVI VRDMDTCSEH RLVFVFWASS  240
RSYVLKGGWM KEFVKRRGLA AGDEVGIYWD AIASKFHFSV LRKAN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010058723.10.0PREDICTED: uncharacterized protein LOC104446582
TrEMBLA0A059C5T81e-160A0A059C5T8_EUCGR; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33720.12e-29B3 family protein